I have .004 neck clearance between loaded ammo and fired necks. Brass gets sized less than .001 from the case head. And shoulders get blown forward 0.002, this is a good chamber. I'm not sure what you mean by high runout when the average of 32 loaded rounds is .002.My assessment:
Runout that high is beyond what mere expansion method can improve.
You must be heavily FL sizing with considerable chamber clearances.